--- a/paper-server/build.gradle.kts
+++ b/paper-server/build.gradle.kts
@@ -21,25 +_,38 @@
     // macheOldPath = file("F:\\Projects\\PaperTooling\\mache\\versions\\1.21.4\\src\\main\\java")
     // gitFilePatches = true
 
+    val fork = forks.register("fork") {
+        upstream.patchDir {
+            name = "paperServer"
+            upstreamPath = "paper-server"
+            excludes = setOf("src/vanilla", "patches", "build.gradle.kts")
+            patchesDir = rootDirectory.dir("fork-server/paper-patches")
+            outputDir = rootDirectory.dir("paper-server")
+        }
+    }
+
+    activeFork = fork
+
     paper {
-        reobfMappingsPatch = layout.projectDirectory.file("../build-data/reobf-mappings-patch.tiny")
-        reobfPackagesToFix.addAll(
-            "co.aikar.timings",
-            "com.destroystokyo.paper",
-            "com.mojang",
-            "io.papermc.paper",
-            "ca.spottedleaf",
-            "net.kyori.adventure.bossbar",
-            "net.minecraft",
-            "org.bukkit.craftbukkit",
-            "org.spigotmc",
-        )
+        paperServerDir = upstreamsDirectory().map { it.dir("paper/paper-server") }
     }
 
     spigot {
         buildDataRef = "3edaf46ec1eed4115ce1b18d2846cded42577e42"
         packageVersion = "v1_21_R3" // also needs to be updated in MappingEnvironment
     }
+
+    reobfPackagesToFix.addAll(
+        "co.aikar.timings",
+        "com.destroystokyo.paper",
+        "com.mojang",
+        "io.papermc.paper",
+        "ca.spottedleaf",
+        "net.kyori.adventure.bossbar",
+        "net.minecraft",
+        "org.bukkit.craftbukkit",
+        "org.spigotmc",
+    )
 }
 
 tasks.generateDevelopmentBundle {
@@ -104,7 +_,20 @@
     }
 }
 
-val log4jPlugins = sourceSets.create("log4jPlugins")
+sourceSets {
+    main {
+        java { srcDir("../paper-server/src/main/java") }
+        resources { srcDir("../paper-server/src/main/resources") }
+    }
+    test {
+        java { srcDir("../paper-server/src/test/java") }
+        resources { srcDir("../paper-server/src/test/resources") }
+    }
+}
+
+val log4jPlugins = sourceSets.create("log4jPlugins") {
+    java { srcDir("../paper-server/src/log4jPlugins/java") }
+}
 configurations.named(log4jPlugins.compileClasspathConfigurationName) {
     extendsFrom(configurations.compileClasspath.get())
 }
@@ -123,7 +_,7 @@
 // Paper end - configure mockito agent that is needed in newer java versions
 
 dependencies {
-    implementation(project(":paper-api"))
+    implementation(project(":fork-api"))
     implementation("ca.spottedleaf:concurrentutil:0.0.2") // Paper - Add ConcurrentUtil dependency
     // Paper start
     implementation("org.jline:jline-terminal-ffm:3.27.1") // use ffm on java 22+
@@ -261,7 +_,7 @@
     name: String,
     block: JavaExec.() -> Unit
 ): TaskProvider<JavaExec> = register<JavaExec>(name) {
-    group = "paper"
+    group = "runs"
     mainClass.set("org.bukkit.craftbukkit.Main")
     standardInput = System.`in`
     workingDir = rootProject.layout.projectDirectory