Added McRegion reader classes (incomplete), moved some com.sk89q.worldedit.data classes around and moved org.jnbt com.sk89q.jnbt to coincide with some modifications to make the JNBT library a bit more generic by accepting uncompressed input streams.

src/com/sk89q/jnbt/ByteArrayTag.java

@@ -1,4 +1,6 @@
-package org.jnbt;
+package com.sk89q.jnbt;
+
+import com.sk89q.jnbt.Tag;
 
 /*
  * JNBT License

src/com/sk89q/jnbt/ByteTag.java

@@ -1,4 +1,6 @@
-package org.jnbt;
+package com.sk89q.jnbt;
+
+import com.sk89q.jnbt.Tag;
 
 /*
  * JNBT License

src/com/sk89q/jnbt/CompoundTag.java

@@ -1,4 +1,4 @@
-package org.jnbt;
+package com.sk89q.jnbt;
 
 /*
  * JNBT License
@@ -35,6 +35,7 @@ package org.jnbt;
 
 import java.util.Collections;
 import java.util.Map;
+import com.sk89q.jnbt.Tag;
 
 /**
  * The <code>TAG_Compound</code> tag.

src/com/sk89q/jnbt/DoubleTag.java

@@ -1,4 +1,6 @@
-package org.jnbt;
+package com.sk89q.jnbt;
+
+import com.sk89q.jnbt.Tag;
 
 /*
  * JNBT License

src/com/sk89q/jnbt/EndTag.java

@@ -1,4 +1,6 @@
-package org.jnbt;
+package com.sk89q.jnbt;
+
+import com.sk89q.jnbt.Tag;
 
 /*
  * JNBT License

src/com/sk89q/jnbt/FloatTag.java

@@ -1,4 +1,6 @@
-package org.jnbt;
+package com.sk89q.jnbt;
+
+import com.sk89q.jnbt.Tag;
 
 /*
  * JNBT License

src/com/sk89q/jnbt/IntTag.java

@@ -1,4 +1,6 @@
-package org.jnbt;
+package com.sk89q.jnbt;
+
+import com.sk89q.jnbt.Tag;
 
 /*
  * JNBT License

src/com/sk89q/jnbt/ListTag.java

@@ -1,4 +1,4 @@
-package org.jnbt;
+package com.sk89q.jnbt;
 
 /*
  * JNBT License
@@ -35,6 +35,8 @@ package org.jnbt;
 
 import java.util.Collections;
 import java.util.List;
+import com.sk89q.jnbt.NBTUtils;
+import com.sk89q.jnbt.Tag;
 
 /**
  * The <code>TAG_List</code> tag.

src/com/sk89q/jnbt/LongTag.java

@@ -1,4 +1,6 @@
-package org.jnbt;
+package com.sk89q.jnbt;
+
+import com.sk89q.jnbt.Tag;
 
 /*
  * JNBT License

src/com/sk89q/jnbt/NBTConstants.java

@@ -1,4 +1,4 @@
-package org.jnbt;
+package com.sk89q.jnbt;
 
 import java.nio.charset.Charset;
 

src/com/sk89q/jnbt/NBTInputStream.java

@@ -1,4 +1,4 @@
-package org.jnbt;
+package com.sk89q.jnbt;
 
 /*
  * JNBT License
@@ -41,7 +41,20 @@ import java.util.ArrayList;
 import java.util.HashMap;
 import java.util.List;
 import java.util.Map;
-import java.util.zip.GZIPInputStream;
+import com.sk89q.jnbt.ByteArrayTag;
+import com.sk89q.jnbt.ByteTag;
+import com.sk89q.jnbt.CompoundTag;
+import com.sk89q.jnbt.DoubleTag;
+import com.sk89q.jnbt.EndTag;
+import com.sk89q.jnbt.FloatTag;
+import com.sk89q.jnbt.IntTag;
+import com.sk89q.jnbt.ListTag;
+import com.sk89q.jnbt.LongTag;
+import com.sk89q.jnbt.NBTConstants;
+import com.sk89q.jnbt.NBTUtils;
+import com.sk89q.jnbt.ShortTag;
+import com.sk89q.jnbt.StringTag;
+import com.sk89q.jnbt.Tag;
 
 /**
  * <p>This class reads <strong>NBT</strong>, or
@@ -68,7 +81,7 @@ public final class NBTInputStream implements Closeable {
 	 * @throws IOException if an I/O error occurs.
 	 */
 	public NBTInputStream(InputStream is) throws IOException {
-		this.is = new DataInputStream(new GZIPInputStream(is));
+		this.is = new DataInputStream(is);
 	}
 	
 	/**

src/com/sk89q/jnbt/NBTOutputStream.java

@@ -1,4 +1,4 @@
-package org.jnbt;
+package com.sk89q.jnbt;
 
 import java.io.Closeable;
 import java.io.DataOutputStream;
@@ -6,6 +6,20 @@ import java.io.IOException;
 import java.io.OutputStream;
 import java.util.List;
 import java.util.zip.GZIPOutputStream;
+import com.sk89q.jnbt.ByteArrayTag;
+import com.sk89q.jnbt.ByteTag;
+import com.sk89q.jnbt.CompoundTag;
+import com.sk89q.jnbt.DoubleTag;
+import com.sk89q.jnbt.EndTag;
+import com.sk89q.jnbt.FloatTag;
+import com.sk89q.jnbt.IntTag;
+import com.sk89q.jnbt.ListTag;
+import com.sk89q.jnbt.LongTag;
+import com.sk89q.jnbt.NBTConstants;
+import com.sk89q.jnbt.NBTUtils;
+import com.sk89q.jnbt.ShortTag;
+import com.sk89q.jnbt.StringTag;
+import com.sk89q.jnbt.Tag;
 
 /*
  * JNBT License

src/com/sk89q/jnbt/NBTUtils.java

@@ -1,4 +1,18 @@
-package org.jnbt;
+package com.sk89q.jnbt;
+
+import com.sk89q.jnbt.ByteArrayTag;
+import com.sk89q.jnbt.ByteTag;
+import com.sk89q.jnbt.CompoundTag;
+import com.sk89q.jnbt.DoubleTag;
+import com.sk89q.jnbt.EndTag;
+import com.sk89q.jnbt.FloatTag;
+import com.sk89q.jnbt.IntTag;
+import com.sk89q.jnbt.ListTag;
+import com.sk89q.jnbt.LongTag;
+import com.sk89q.jnbt.NBTConstants;
+import com.sk89q.jnbt.ShortTag;
+import com.sk89q.jnbt.StringTag;
+import com.sk89q.jnbt.Tag;
 
 /*
  * JNBT License

src/com/sk89q/jnbt/ShortTag.java

@@ -1,4 +1,6 @@
-package org.jnbt;
+package com.sk89q.jnbt;
+
+import com.sk89q.jnbt.Tag;
 
 /*
  * JNBT License

src/com/sk89q/jnbt/StringTag.java

@@ -1,4 +1,6 @@
-package org.jnbt;
+package com.sk89q.jnbt;
+
+import com.sk89q.jnbt.Tag;
 
 /*
  * JNBT License

src/com/sk89q/jnbt/Tag.java

@@ -1,4 +1,4 @@
-package org.jnbt;
+package com.sk89q.jnbt;
 
 /*
  * JNBT License

src/com/sk89q/worldedit/CuboidClipboard.java

@@ -19,14 +19,15 @@
 
 package com.sk89q.worldedit;
 
+import com.sk89q.jnbt.*;
 import com.sk89q.worldedit.blocks.*;
 import com.sk89q.worldedit.data.*;
-import org.jnbt.*;
 import java.io.*;
 import java.util.Map;
 import java.util.HashMap;
 import java.util.ArrayList;
 import java.util.List;
+import java.util.zip.GZIPInputStream;
 
 /**
  * The clipboard remembers the state of a cuboid region.
@@ -381,7 +382,8 @@ public class CuboidClipboard {
     public static CuboidClipboard loadSchematic(File path)
             throws DataException, IOException {
         FileInputStream stream = new FileInputStream(path);
-        NBTInputStream nbtStream = new NBTInputStream(stream);
+        NBTInputStream nbtStream = new NBTInputStream(
+                new GZIPInputStream(stream));
 
         Vector origin = new Vector();
         Vector offset = new Vector();

src/com/sk89q/worldedit/EditSession.java

@@ -2109,7 +2109,7 @@ public class EditSession {
 
     /**
      * Returns the highest solid 'terrain' block which can occur naturally.
-     * Looks at: 1, 2, 3, 7, 12, 13, 14, 15, 16, 56, 73, 74, 87, 88, 89
+     * Looks at: 1, 2, 3, 7, 12, 13, 14, 15, 16, 56, 73, 74, 87, 88, 89, 82
      * 
      * @param x
      * @param z
@@ -2131,6 +2131,7 @@ public class EditSession {
                     || id == 7 // bedrock
                     || id == 12 // sand
                     || id == 13 // gravel
+                    || id == 82 // clay
                     // hell
                     || id == 87 // netherstone
                     || id == 88 // slowsand

src/com/sk89q/worldedit/blocks/ChestBlock.java

@@ -19,12 +19,12 @@
 
 package com.sk89q.worldedit.blocks;
 
+import com.sk89q.jnbt.*;
 import com.sk89q.worldedit.data.*;
 import java.util.Map;
 import java.util.HashMap;
 import java.util.List;
 import java.util.ArrayList;
-import org.jnbt.*;
 
 /**
  * Represents chests.

src/com/sk89q/worldedit/blocks/DispenserBlock.java

@@ -19,12 +19,12 @@
 
 package com.sk89q.worldedit.blocks;
 
+import com.sk89q.jnbt.*;
 import com.sk89q.worldedit.data.*;
 import java.util.Map;
 import java.util.HashMap;
 import java.util.List;
 import java.util.ArrayList;
-import org.jnbt.*;
 
 /**
  * Represents dispensers.

src/com/sk89q/worldedit/blocks/FurnaceBlock.java

@@ -19,12 +19,12 @@
 
 package com.sk89q.worldedit.blocks;
 
+import com.sk89q.jnbt.*;
 import com.sk89q.worldedit.data.*;
 import java.util.Map;
 import java.util.HashMap;
 import java.util.List;
 import java.util.ArrayList;
-import org.jnbt.*;
 
 /**
  * Represents furnaces.

src/com/sk89q/worldedit/blocks/MobSpawnerBlock.java

@@ -19,10 +19,10 @@
 
 package com.sk89q.worldedit.blocks;
 
+import com.sk89q.jnbt.*;
 import com.sk89q.worldedit.data.*;
 import java.util.Map;
 import java.util.HashMap;
-import org.jnbt.*;
 
 /**
  * Represents chests.

src/com/sk89q/worldedit/blocks/NoteBlock.java

@@ -19,10 +19,10 @@
 
 package com.sk89q.worldedit.blocks;
 
+import com.sk89q.jnbt.*;
 import com.sk89q.worldedit.data.*;
 import java.util.Map;
 import java.util.HashMap;
-import org.jnbt.*;
 
 /**
  *

src/com/sk89q/worldedit/blocks/SignBlock.java

@@ -19,10 +19,10 @@
 
 package com.sk89q.worldedit.blocks;
 
+import com.sk89q.jnbt.*;
 import com.sk89q.worldedit.data.*;
 import java.util.Map;
 import java.util.HashMap;
-import org.jnbt.*;
 
 /**
  *

src/com/sk89q/worldedit/blocks/TileEntityBlock.java

@@ -19,9 +19,9 @@
 
 package com.sk89q.worldedit.blocks;
 
+import com.sk89q.jnbt.Tag;
 import com.sk89q.worldedit.data.*;
 import java.util.Map;
-import org.jnbt.Tag;
 
 /**
  * A class implementing this interface has extra TileEntityBlock data to store.

src/com/sk89q/worldedit/commands/ChunkCommands.java

@@ -25,7 +25,7 @@ import com.sk89q.minecraft.util.commands.Command;
 import com.sk89q.minecraft.util.commands.CommandContext;
 import com.sk89q.minecraft.util.commands.CommandPermissions;
 import com.sk89q.worldedit.*;
-import com.sk89q.worldedit.data.NestedFileChunkStore;
+import com.sk89q.worldedit.data.LegacyChunkStore;
 
 /**
  * Chunk tools.
@@ -73,7 +73,7 @@ public class ChunkCommands {
         Set<Vector2D> chunks = session.getSelection(player.getWorld()).getChunks();
 
         for (Vector2D chunk : chunks) {
-            player.print(NestedFileChunkStore.getFilename(chunk));
+            player.print(LegacyChunkStore.getFilename(chunk));
         }
     }
 
@@ -109,7 +109,7 @@ public class ChunkCommands {
                 writer.write("PAUSE\r\n");
 
                 for (Vector2D chunk : chunks) {
-                    String filename = NestedFileChunkStore.getFilename(chunk);
+                    String filename = LegacyChunkStore.getFilename(chunk);
                     writer.write("ECHO " + filename + "\r\n");
                     writer.write("DEL \"world/" + filename + "\"\r\n");
                 }
@@ -138,7 +138,7 @@ public class ChunkCommands {
                 writer.write("read -p \"Press any key to continue...\"\n");
 
                 for (Vector2D chunk : chunks) {
-                    String filename = NestedFileChunkStore.getFilename(chunk);
+                    String filename = LegacyChunkStore.getFilename(chunk);
                     writer.write("echo " + filename + "\n");
                     writer.write("rm \"world/" + filename + "\"\n");
                 }

src/com/sk89q/worldedit/data/Chunk.java

@@ -23,9 +23,9 @@ package com.sk89q.worldedit.data;
 import java.util.List;
 import java.util.Map;
 import java.util.HashMap;
+import com.sk89q.jnbt.*;
 import com.sk89q.worldedit.*;
 import com.sk89q.worldedit.blocks.*;
-import org.jnbt.*;
 
 /**
  * Represents a chunk.

src/com/sk89q/worldedit/data/ChunkStore.java

@@ -20,8 +20,8 @@
 package com.sk89q.worldedit.data;
 
 import java.io.*;
+import com.sk89q.jnbt.*;
 import com.sk89q.worldedit.*;
-import org.jnbt.*;
 
 /**
  * Represents chunk storage mechanisms.

src/com/sk89q/worldedit/data/FileLegacyChunkStore.java

@@ -26,7 +26,7 @@ import java.io.*;
  *
  * @author sk89q
  */
-public class AlphaChunkStore extends NestedFileChunkStore {
+public class FileLegacyChunkStore extends LegacyChunkStore {
     /**
      * Folder to read from.
      */
@@ -38,7 +38,7 @@ public class AlphaChunkStore extends NestedFileChunkStore {
      * 
      * @param path
      */
-    public AlphaChunkStore(File path) {
+    public FileLegacyChunkStore(File path) {
         this.path = path;
     }
 

src/com/sk89q/worldedit/data/FileMcRegionChunkStore.java

@@ -0,0 +1,57 @@
+// $Id$
+/*
+ * WorldEdit
+ * Copyright (C) 2010, 2011 sk89q <http://www.sk89q.com>
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or
+ * (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
+
+package com.sk89q.worldedit.data;
+
+import java.io.File;
+import java.io.FileInputStream;
+import java.io.FileNotFoundException;
+import java.io.IOException;
+import java.io.InputStream;
+
+public class FileMcRegionChunkStore extends McRegionChunkStore {
+    /**
+     * Folder to read from.
+     */
+    private File path;
+
+    /**
+     * Create an instance. The passed path is the folder to read the
+     * chunk files from.
+     * 
+     * @param path
+     */
+    public FileMcRegionChunkStore(File path) {
+        this.path = path;
+    }
+
+    @Override
+    protected InputStream getInputStream(String name) throws IOException,
+            DataException {
+        
+        String file = "region" + File.separator + name;
+        
+        try {
+            return new FileInputStream(new File(path, file));
+        } catch (FileNotFoundException e) {
+            throw new MissingChunkException();
+        }
+    }
+
+}

src/com/sk89q/worldedit/data/ForwardSeekableInputStream.java

@@ -0,0 +1,100 @@
+// $Id$
+/*
+ * WorldEdit
+ * Copyright (C) 2010, 2011 sk89q <http://www.sk89q.com>
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or
+ * (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
+
+package com.sk89q.worldedit.data;
+
+import java.io.IOException;
+import java.io.InputStream;
+
+public class ForwardSeekableInputStream extends InputStream {
+    
+    protected InputStream parent;
+    protected long position = 0;
+    
+    public ForwardSeekableInputStream(InputStream parent) {
+        this.parent = parent;
+    }
+
+    @Override
+    public int read() throws IOException {
+        int ret = parent.read();
+        position++;
+        return ret;
+    }
+
+    @Override
+    public int available() throws IOException {
+        return parent.available();
+    }
+
+    @Override
+    public void close() throws IOException {
+        parent.close();
+    }
+
+    @Override
+    public synchronized void mark(int readlimit) {
+        parent.mark(readlimit);
+    }
+
+    @Override
+    public boolean markSupported() {
+        return parent.markSupported();
+    }
+
+    @Override
+    public int read(byte[] b, int off, int len) throws IOException {
+        throw new IOException("Offset not supported for read()");
+    }
+
+    @Override
+    public int read(byte[] b) throws IOException {
+        int read = parent.read(b);
+        position += read;
+        return read;
+    }
+
+    @Override
+    public synchronized void reset() throws IOException {
+        parent.reset();
+    }
+
+    @Override
+    public long skip(long n) throws IOException {
+        long skipped = parent.skip(n);
+        position += skipped;
+        return skipped;
+    }
+    
+    public void seek(long n) throws IOException {
+        long diff = n - position;
+        
+        if (diff < 0) {
+            throw new IOException("Can't seek backwards");
+        }
+        
+        if (diff == 0) {
+            return;
+        }
+        
+        if (skip(diff) < diff) {
+            throw new IOException("Failed to seek " + diff + " bytes");
+        }
+    }
+}

src/com/sk89q/worldedit/data/LegacyChunkStore.java

@@ -19,10 +19,13 @@
 
 package com.sk89q.worldedit.data;
 
+import com.sk89q.jnbt.CompoundTag;
+import com.sk89q.jnbt.NBTInputStream;
+import com.sk89q.jnbt.Tag;
 import com.sk89q.worldedit.*;
 import java.io.*;
 import java.util.Map;
-import org.jnbt.*;
+import java.util.zip.GZIPInputStream;
 
 /**
  * Represents chunk stores that use Alpha's file format for storing chunks.
@@ -31,7 +34,7 @@ import org.jnbt.*;
  *
  * @author sk89q
  */
-public abstract class NestedFileChunkStore extends ChunkStore {
+public abstract class LegacyChunkStore extends ChunkStore {
     /**
      * Get the filename of a chunk.
      * 
@@ -82,7 +85,8 @@ public abstract class NestedFileChunkStore extends ChunkStore {
                 + "." + Integer.toString(z, 36) + ".dat";
 
         InputStream stream = getInputStream(folder1, folder2, filename);
-        NBTInputStream nbt = new NBTInputStream(stream);
+        NBTInputStream nbt = new NBTInputStream(
+                new GZIPInputStream(stream));
         Tag tag;
 
         try {

src/com/sk89q/worldedit/data/McRegionChunkStore.java

@@ -0,0 +1,123 @@
+// $Id$
+/*
+ * WorldEdit
+ * Copyright (C) 2010, 2011 sk89q <http://www.sk89q.com>
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or
+ * (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
+
+package com.sk89q.worldedit.data;
+
+import java.io.IOException;
+import java.io.InputStream;
+import java.util.Map;
+import com.sk89q.jnbt.CompoundTag;
+import com.sk89q.jnbt.NBTInputStream;
+import com.sk89q.jnbt.Tag;
+import com.sk89q.worldedit.Vector2D;
+
+public abstract class McRegionChunkStore extends ChunkStore {
+    protected String curFilename = null;
+    protected McRegionReader cachedReader = null;
+    
+    /**
+     * Get the filename of a region file.
+     * 
+     * @param pos
+     * @return
+     */
+    public static String getFilename(Vector2D pos) {
+        int x = pos.getBlockX();
+        int z = pos.getBlockZ();
+        
+        String filename = "r." + (x >> 5) + "." + (z >> 5) + ".mcr";
+
+        return filename;
+    }
+    
+    protected McRegionReader getReader(Vector2D pos) throws DataException, IOException {
+        String filename = getFilename(pos);
+        if (curFilename.equals(filename)) {
+            return cachedReader;
+        }
+        InputStream stream = getInputStream(filename);
+        cachedReader = new McRegionReader(stream);
+        return cachedReader;
+    }
+
+    @Override
+    public CompoundTag getChunkTag(Vector2D pos) throws DataException,
+            IOException {
+        
+        McRegionReader reader = getReader(pos);
+        InputStream stream = reader.getChunkInputStream(pos);
+        NBTInputStream nbt = new NBTInputStream(stream);
+        Tag tag;
+
+        try {
+            tag = nbt.readTag();
+            if (!(tag instanceof CompoundTag)) {
+                throw new ChunkStoreException("CompoundTag expected for chunk; got "
+                        + tag.getClass().getName());
+            }
+
+            Map<String,Tag> children = (Map<String,Tag>)((CompoundTag)tag).getValue();
+            CompoundTag rootTag = null;
+
+            // Find Level tag
+            for (Map.Entry<String,Tag> entry : children.entrySet()) {
+                if (entry.getKey().equals("Level")) {
+                    if (entry.getValue() instanceof CompoundTag) {
+                        rootTag = (CompoundTag)entry.getValue();
+                        break;
+                    } else {
+                        throw new ChunkStoreException("CompoundTag expected for 'Level'; got "
+                                + entry.getValue().getClass().getName());
+                    }
+                }
+            }
+
+            if (rootTag == null) {
+                throw new ChunkStoreException("Missing root 'Level' tag");
+            }
+
+            return rootTag;
+        } finally {
+            stream.close();
+        }
+    }
+
+    /**
+     * Get the input stream for a chunk file.
+     * 
+     * @param name
+     * @return
+     * @throws IOException
+     */
+    protected abstract InputStream getInputStream(String name)
+            throws IOException, DataException;
+    
+
+    /**
+     * Close resources.
+     *
+     * @throws IOException
+     */
+    @Override
+    public void close() throws IOException {
+        if (cachedReader != null) {
+            cachedReader.close();
+        }
+    }
+}

src/com/sk89q/worldedit/data/McRegionReader.java

@@ -0,0 +1,197 @@
+// $Id$
+/*
+ * WorldEdit
+ * Copyright (C) 2010 sk89q <http://www.sk89q.com>
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or
+ * (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
+
+/*
+
+ Region File Format
+
+ Concept: The minimum unit of storage on hard drives is 4KB. 90% of Minecraft
+ chunks are smaller than 4KB. 99% are smaller than 8KB. Write a simple
+ container to store chunks in single files in runs of 4KB sectors.
+
+ Each region file represents a 32x32 group of chunks. The conversion from
+ chunk number to region number is floor(coord / 32): a chunk at (30, -3)
+ would be in region (0, -1), and one at (70, -30) would be at (3, -1).
+ Region files are named "r.x.z.data", where x and z are the region coordinates.
+
+ A region file begins with a 4KB header that describes where chunks are stored
+ in the file. A 4-byte big-endian integer represents sector offsets and sector
+ counts. The chunk offset for a chunk (x, z) begins at byte 4*(x+z*32) in the
+ file. The bottom byte of the chunk offset indicates the number of sectors the
+ chunk takes up, and the top 3 bytes represent the sector number of the chunk.
+ Given a chunk offset o, the chunk data begins at byte 4096*(o/256) and takes up
+ at most 4096*(o%256) bytes. A chunk cannot exceed 1MB in size. If a chunk
+ offset is 0, the corresponding chunk is not stored in the region file.
+
+ Chunk data begins with a 4-byte big-endian integer representing the chunk data
+ length in bytes, not counting the length field. The length must be smaller than
+ 4096 times the number of sectors. The next byte is a version field, to allow
+ backwards-compatible updates to how chunks are encoded.
+
+ A version of 1 represents a gzipped NBT file. The gzipped data is the chunk
+ length - 1.
+
+ A version of 2 represents a deflated (zlib compressed) NBT file. The deflated
+ data is the chunk length - 1.
+
+ */
+
+package com.sk89q.worldedit.data;
+
+import java.io.*;
+import java.util.zip.*;
+import com.sk89q.worldedit.Vector2D;
+
+/**
+ * Reader for a MCRegion file. This reader works on input streams, meaning
+ * that it can be used to read files from non-file based sources.
+ *
+ * @author sk89q
+ */
+public class McRegionReader {
+
+    protected static final int VERSION_GZIP = 1;
+    protected static final int VERSION_DEFLATE = 2;
+    protected static final int SECTOR_BYTES = 4096;
+    protected static final int SECTOR_INTS = SECTOR_BYTES / 4;
+    public static final int CHUNK_HEADER_SIZE = 5;
+
+    protected ForwardSeekableInputStream stream;
+    protected DataInputStream dataStream;
+    
+    protected int offsets[];
+
+    /**
+     * Construct the reader.
+     * 
+     * @param stream
+     * @throws DataException
+     * @throws IOException
+     */
+    public McRegionReader(InputStream stream) throws DataException, IOException {
+        this.stream = new ForwardSeekableInputStream(stream);
+        this.dataStream = new DataInputStream(this.stream);
+        
+        readHeader();
+    }
+    
+    /**
+     * Read the header.
+     * 
+     * @throws DataException
+     * @throws IOException
+     */
+    private void readHeader() throws DataException, IOException {
+        offsets = new int[SECTOR_INTS];
+
+        for (int i = 0; i < SECTOR_INTS; ++i) {
+            int offset = dataStream.readInt();
+            offsets[i] = offset;
+        }
+    }
+
+    /**
+     * Gets the uncompressed data input stream for a chunk.
+     * 
+     * @param pos
+     * @return
+     * @throws IOException
+     * @throws DataException
+     */
+    public synchronized InputStream getChunkInputStream(Vector2D pos)
+            throws IOException, DataException {
+
+        int x = pos.getBlockX();
+        int z = pos.getBlockZ();
+        
+        if (x < 0 || x >= 32 || z < 0 || z >= 32) {
+            throw new DataException("MCRegion file does not contain " + x + "," + z);
+        }
+
+        int offset = getOffset(x, z);
+        
+        // The chunk hasn't been generated
+        if (offset == 0) {
+            return null;
+        }
+
+        int sectorNumber = offset >> 8;
+        int numSectors = offset & 0xFF;
+
+        stream.seek(sectorNumber * SECTOR_BYTES);
+        int length = dataStream.readInt();
+
+        if (length > SECTOR_BYTES * numSectors) {
+            throw new DataException("MCRegion chunk at "
+                    + x + "," + z + " has an invalid length of " + length);
+        }
+
+        byte version = dataStream.readByte();
+        
+        if (version == VERSION_GZIP) {
+            byte[] data = new byte[length - 1];
+            if (dataStream.read(data) < length - 1) {
+                throw new DataException("MCRegion file does not contain "
+                        + x + "," + z + " in full");
+            }
+            return new GZIPInputStream(new ByteArrayInputStream(data));
+        } else if (version == VERSION_DEFLATE) {
+            byte[] data = new byte[length - 1];
+            if (dataStream.read(data) < length - 1) {
+                throw new DataException("MCRegion file does not contain "
+                        + x + "," + z + " in full");
+            }
+            return new InflaterInputStream(new ByteArrayInputStream(data));
+        } else {
+            throw new DataException("MCRegion chunk at "
+                    + x + "," + z + " has an unsupported version of " + version);
+        }
+    }
+
+    /**
+     * Get the offset for a chunk. May return 0 if it doesn't exist.
+     * 
+     * @param x
+     * @param z
+     * @return
+     */
+    private int getOffset(int x, int z) {
+        return offsets[x + z * 32];
+    }
+
+    /**
+     * Returns whether the file contains a chunk.
+     * 
+     * @param x
+     * @param z
+     * @return
+     */
+    public boolean hasChunk(int x, int z) {
+        return getOffset(x, z) != 0;
+    }
+    
+    /**
+     * Close the stream.
+     * 
+     * @throws IOException
+     */
+    public void close() throws IOException {
+        stream.close();
+    }
+}

src/com/sk89q/worldedit/data/TrueZipAlphaChunkStore.java

@@ -1,157 +0,0 @@
-// $Id$
-/*
- * WorldEdit
- * Copyright (C) 2010 sk89q <http://www.sk89q.com>
- *
- * This program is free software: you can redistribute it and/or modify
- * it under the terms of the GNU General Public License as published by
- * the Free Software Foundation, either version 3 of the License, or
- * (at your option) any later version.
- *
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- * GNU General Public License for more details.
- *
- * You should have received a copy of the GNU General Public License
- * along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
-
-package com.sk89q.worldedit.data;
-
-import de.schlichtherle.io.*;
-import de.schlichtherle.io.File;
-import de.schlichtherle.io.FileInputStream;
-import java.io.*;
-import java.util.regex.Pattern;
-
-/**
- * Represents the chunk store used by Minecraft alpha. This driver uses
- * TrueZip to read zip files, althoguh it currently does not work well.
- *
- * @author sk89q
- */
-public class TrueZipAlphaChunkStore extends NestedFileChunkStore {
-    /**
-     * Folder to read from.
-     */
-    private File path;
-
-    /**
-     * Create an instance. The passed path is the folder to read the
-     * chunk files from.
-     *
-     * @param path
-     */
-    public TrueZipAlphaChunkStore(java.io.File path) {
-        this.path = new File(path);
-        File root = findWorldPath(this.path);
-        if (root != null) {
-            this.path = root;
-        }
-    }
-
-    /**
-     * Create an instance. The passed path is the folder to read the
-     * chunk files from.
-     *
-     * @param path
-     */
-    public TrueZipAlphaChunkStore(File path) {
-        this.path = path;
-        File root = findWorldPath(path);
-        if (root != null) {
-            this.path = root;
-        }
-    }
-
-    /**
-     * Create an instance. The passed path is the folder to read the
-     * chunk files from.
-     *
-     * @param path
-     */
-    public TrueZipAlphaChunkStore(String path) {
-        this.path = new File(path);
-        File root = findWorldPath(this.path);
-        if (root != null) {
-            this.path = root;
-        }
-    }
-
-    /**
-     * Get the input stream for a chunk file.
-     *
-     * @param f1
-     * @param f2
-     * @param name
-     * @return
-     * @throws DataException
-     * @throws IOException
-     */
-    @Override
-    protected InputStream getInputStream(String f1, String f2, String name)
-            throws DataException, IOException {
-        String file = f1 + File.separator + f2 + File.separator + name;
-        File f = new File(path, file);
-        try {
-            return new FileInputStream(f.getAbsolutePath());
-        } catch (FileNotFoundException e) {
-            throw new MissingChunkException();
-        }
-    }
-
-    /**
-     * Find the root directory for the chunk files.
-     *
-     * @param path
-     * @return
-     */
-    private File findWorldPath(File path) {
-        File f = new File(path, "world");
-        
-        if (path.contains(f)) {
-            return f;
-        }
-
-        return searchForPath(path);
-    }
-
-    /**
-     * Find the root directory for the chunk files.
-     * 
-     * @param path
-     * @return
-     */
-    private File searchForPath(File path) {
-        String[] children = path.list();
-        
-        Pattern pattern = Pattern.compile(".*[\\\\/]level\\.dat$");
-
-        if (children == null) {
-            return null;
-        } else {
-            for (String f : children) {
-                if (pattern.matcher(f).matches()) {
-                    return (File)(new File(path, f)).getParentFile();
-                }
-            }
-        }
-
-        return null;
-    }
-
-    /**
-     * Close the archive.
-     *
-     * @throws IOException
-     */
-    @Override
-    public void close() throws IOException {
-        try {
-            File.umount(new File(path));
-        } catch (ArchiveException e) {
-            throw new IOException(e);
-        }
-    }
-}

src/com/sk89q/worldedit/data/TrueZipLegacyChunkStore.java

@@ -1,167 +1,167 @@
-// $Id$
-/*
- * WorldEdit
- * Copyright (C) 2010 sk89q <http://www.sk89q.com>
- *
- * This program is free software: you can redistribute it and/or modify
- * it under the terms of the GNU General Public License as published by
- * the Free Software Foundation, either version 3 of the License, or
- * (at your option) any later version.
- *
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- * GNU General Public License for more details.
- *
- * You should have received a copy of the GNU General Public License
- * along with this program. If not, see <http://www.gnu.org/licenses/>.
-*/
-
-package com.sk89q.worldedit.data;
-
-import java.io.*;
-import java.util.regex.Pattern;
-import java.util.zip.ZipException;
-import java.util.Enumeration;
-import de.schlichtherle.util.zip.*;
-
-/**
- * Represents the chunk store used by Minecraft alpha but zipped. Uses
- * the replacement classes for java.util.zip.* from TrueZip.
- *
- * @author sk89q
- */
-public class TrueZipLegacyAlphaChunkStore extends NestedFileChunkStore {
-    /**
-     * ZIP file.
-     */
-    @SuppressWarnings("unused")
-    private File zipFile;
-    /**
-     * Actual ZIP.
-     */
-    private ZipFile zip;
-    /**
-     * Folder inside the ZIP file to read from, if any.
-     */
-    private String folder;
-
-    /**
-     * Create an instance. The folder argument lets you choose a folder or
-     * path to look into in the ZIP for the files. Use a blank string for
-     * the folder to not look into a subdirectory.
-     *
-     * @param zipFile
-     * @param folder
-     * @throws IOException
-     * @throws ZipException 
-     */
-    public TrueZipLegacyAlphaChunkStore(File zipFile, String folder)
-            throws IOException, ZipException {
-        this.zipFile = zipFile;
-        this.folder = folder;
-        
-        zip = new ZipFile(zipFile);
-    }
-
-    /**
-     * Create an instance. The subfolder containing the chunk data will
-     * be detected.
-     *
-     * @param zipFile
-     * @throws IOException
-     * @throws ZipException
-     */
-    public TrueZipLegacyAlphaChunkStore(File zipFile)
-            throws IOException, ZipException {
-        this.zipFile = zipFile;
-
-        zip = new ZipFile(zipFile);
-    }
-
-    /**
-     * Get the input stream for a chunk file.
-     *
-     * @param f1
-     * @param f2
-     * @param name
-     * @return
-     * @throws IOException
-     * @throws DataException
-     */
-    @Override
-    @SuppressWarnings("unchecked")
-    protected InputStream getInputStream(String f1, String f2, String name)
-            throws IOException, DataException {
-        String file = f1 + "/" + f2 + "/" + name;
-
-        // Detect subfolder for the world's files
-        if (folder != null) {
-            if (!folder.equals("")) {
-                file = folder + "/" + file;
-            }
-        } else {
-            ZipEntry testEntry = zip.getEntry("level.dat");
-
-            // So, the data is not in the root directory
-            if (testEntry == null) {
-                // Let's try a world/ sub-directory
-                testEntry = getEntry("world/level.dat");
-                
-                Pattern pattern = Pattern.compile(".*[\\\\/]level\\.dat$");
-
-                // So not there either...
-                if (testEntry == null) {
-                    for (Enumeration<? extends ZipEntry> e = zip.entries();
-                            e.hasMoreElements(); ) {
-                        
-                        testEntry = (ZipEntry)e.nextElement();
-
-                        // Whoo, found level.dat!
-                        if (pattern.matcher(testEntry.getName()).matches()) {
-                            file = testEntry.getName().replaceAll("level\\.dat$", "")
-                                    + file;
-                            break;
-                        }
-                    }
-                } else {
-                    file = "world/" + file;
-                }
-            }
-        }
-
-        ZipEntry entry = getEntry(file);
-        if (entry == null) {
-            throw new MissingChunkException();
-        }
-        try {
-            return zip.getInputStream(entry);
-        } catch (ZipException e) {
-            throw new IOException("Failed to read " + file + " in ZIP");
-        }
-    }
-    
-    /**
-     * Get an entry from the ZIP, trying both types of slashes.
-     * 
-     * @param file
-     * @return
-     */
-    private ZipEntry getEntry(String file) {
-        ZipEntry entry = zip.getEntry(file);
-        if (entry != null) {
-            return entry;
-        }
-        return zip.getEntry(file.replace("/", "\\"));
-    }
-
-    /**
-     * Close resources.
-     *
-     * @throws IOException
-     */
-    @Override
-    public void close() throws IOException {
-        zip.close();
-    }
-}
+// $Id$
+/*
+ * WorldEdit
+ * Copyright (C) 2010 sk89q <http://www.sk89q.com>
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or
+ * (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
+
+package com.sk89q.worldedit.data;
+
+import java.io.*;
+import java.util.regex.Pattern;
+import java.util.zip.ZipException;
+import java.util.Enumeration;
+import de.schlichtherle.util.zip.*;
+
+/**
+ * Represents the chunk store used by Minecraft alpha but zipped. Uses
+ * the replacement classes for java.util.zip.* from TrueZip.
+ *
+ * @author sk89q
+ */
+public class TrueZipLegacyChunkStore extends LegacyChunkStore {
+    /**
+     * ZIP file.
+     */
+    @SuppressWarnings("unused")
+    private File zipFile;
+    /**
+     * Actual ZIP.
+     */
+    private ZipFile zip;
+    /**
+     * Folder inside the ZIP file to read from, if any.
+     */
+    private String folder;
+
+    /**
+     * Create an instance. The folder argument lets you choose a folder or
+     * path to look into in the ZIP for the files. Use a blank string for
+     * the folder to not look into a subdirectory.
+     *
+     * @param zipFile
+     * @param folder
+     * @throws IOException
+     * @throws ZipException 
+     */
+    public TrueZipLegacyChunkStore(File zipFile, String folder)
+            throws IOException, ZipException {
+        this.zipFile = zipFile;
+        this.folder = folder;
+        
+        zip = new ZipFile(zipFile);
+    }
+
+    /**
+     * Create an instance. The subfolder containing the chunk data will
+     * be detected.
+     *
+     * @param zipFile
+     * @throws IOException
+     * @throws ZipException
+     */
+    public TrueZipLegacyChunkStore(File zipFile)
+            throws IOException, ZipException {
+        this.zipFile = zipFile;
+
+        zip = new ZipFile(zipFile);
+    }
+
+    /**
+     * Get the input stream for a chunk file.
+     *
+     * @param f1
+     * @param f2
+     * @param name
+     * @return
+     * @throws IOException
+     * @throws DataException
+     */
+    @Override
+    @SuppressWarnings("unchecked")
+    protected InputStream getInputStream(String f1, String f2, String name)
+            throws IOException, DataException {
+        String file = f1 + "/" + f2 + "/" + name;
+
+        // Detect subfolder for the world's files
+        if (folder != null) {
+            if (!folder.equals("")) {
+                file = folder + "/" + file;
+            }
+        } else {
+            ZipEntry testEntry = zip.getEntry("level.dat");
+
+            // So, the data is not in the root directory
+            if (testEntry == null) {
+                // Let's try a world/ sub-directory
+                testEntry = getEntry("world/level.dat");
+                
+                Pattern pattern = Pattern.compile(".*[\\\\/]level\\.dat$");
+
+                // So not there either...
+                if (testEntry == null) {
+                    for (Enumeration<? extends ZipEntry> e = zip.entries();
+                            e.hasMoreElements(); ) {
+                        
+                        testEntry = (ZipEntry)e.nextElement();
+
+                        // Whoo, found level.dat!
+                        if (pattern.matcher(testEntry.getName()).matches()) {
+                            file = testEntry.getName().replaceAll("level\\.dat$", "")
+                                    + file;
+                            break;
+                        }
+                    }
+                } else {
+                    file = "world/" + file;
+                }
+            }
+        }
+
+        ZipEntry entry = getEntry(file);
+        if (entry == null) {
+            throw new MissingChunkException();
+        }
+        try {
+            return zip.getInputStream(entry);
+        } catch (ZipException e) {
+            throw new IOException("Failed to read " + file + " in ZIP");
+        }
+    }
+    
+    /**
+     * Get an entry from the ZIP, trying both types of slashes.
+     * 
+     * @param file
+     * @return
+     */
+    private ZipEntry getEntry(String file) {
+        ZipEntry entry = zip.getEntry(file);
+        if (entry != null) {
+            return entry;
+        }
+        return zip.getEntry(file.replace("/", "\\"));
+    }
+
+    /**
+     * Close resources.
+     *
+     * @throws IOException
+     */
+    @Override
+    public void close() throws IOException {
+        zip.close();
+    }
+}

src/com/sk89q/worldedit/data/ZippedAlphaChunkStore.java

@@ -29,7 +29,7 @@ import java.util.Enumeration;
  *
  * @author sk89q
  */
-public class ZippedAlphaChunkStore extends NestedFileChunkStore {
+public class ZippedAlphaChunkStore extends LegacyChunkStore {
     /**
      * ZIP file.
      */

src/com/sk89q/worldedit/snapshots/Snapshot.java

@@ -21,12 +21,15 @@ package com.sk89q.worldedit.snapshots;
 
 import com.sk89q.worldedit.data.*;
 import java.io.*;
+import java.util.logging.Logger;
 
 /**
  *
  * @author sk89q
  */
 public class Snapshot {
+    protected static Logger logger = Logger.getLogger("Minecraft.WorldEdit");
+    
     /**
      * Stores snapshot file.
      */
@@ -57,7 +60,7 @@ public class Snapshot {
     public ChunkStore getChunkStore() throws IOException, DataException {
         if (file.getName().toLowerCase().endsWith(".zip")) {
             try {
-                return new TrueZipLegacyAlphaChunkStore(file);
+                return new TrueZipLegacyChunkStore(file);
             } catch (NoClassDefFoundError e) {
                 return new ZippedAlphaChunkStore(file);
             }
@@ -65,12 +68,12 @@ public class Snapshot {
                 || file.getName().toLowerCase().endsWith(".tar.gz")
                 || file.getName().toLowerCase().endsWith(".tar")) {
             try {
-                return new TrueZipAlphaChunkStore(file);
+                return new TrueZipLegacyChunkStore(file);
             } catch (NoClassDefFoundError e) {
                 throw new DataException("TrueZIP is required for .tar support");
             }
         } else {
-            return new AlphaChunkStore(file);
+            return new FileLegacyChunkStore(file);
         }
     }